Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015916107.1_cds_XP_016465802.1_58722
CDS Infomation

[gene=LOC107788624] [db_xref=GeneID:107788624] [protein=3-isopropylmalate dehydratase large subunit-like] [partial=3'] [protein_id=XP_016465802.1] [location=join(37022..37072,37177..37314,38858..39028,39837..39989,40094..40162,40254..40370,41021..41095,41251..41328,41406..41501,41678..41727,45477..45531,45834..45965,47032..47079,47167..>47268)] [gbkey=CDS]
Sequence

ATGGCGTCTTCAGCTGTAGCTTCAAGCTCCACATTTCATGTCATCAACAAGAGAGATGTG
GGTCTATCAGCTTTCTCATCACAACCTTCATTTTGCATTCAAACTACCAAGAAGAAGGTG
GTTTCCAAGAAAATATTTTCTGTAATGTCACCACAACAGACTGAACGCAAACCAGCTACC
ACTGGCTCAGTTAAGACTGGGATGACTATGACTGAGAAGATATTAGCTAGGGCTTCTGAC
AAGCCTGAAGTTACTCCTGGTGATAATGTGTGGGTCAATGTTGATGTTCTGATGACACAT
GATATTGGTGGCCCGGCCTCTTTTGGAGTTTTCAAAGAACAATTTGGACAGAAAGCTAAG
GTCTGGAATCCTGAGAAGATTGTCATCATACCTGATCACTACATATTCACGGCTGACGAG
CGAGCAAACCGTAATGTGGATGTGTTGAGGGACTACTGCAGTGAGCAAAATATTAAGTAC
TTCTATGACATTAAAGATCGCGGGAACTTCCGGGCTAATCCAGATTACAAAGGCGTCTGC
CATGTTGCTCTTGCCCAAGAAGGTCACTGCAGACCTGGAGAGGTTTTGTTGGGAACAGAC
TCTCATACATGTACTGCCGGAGCGTTTGGGCAATTTGCTACCGGAATTGGCACTACAGAT
GCAGGTTTTGTGTTGGGTACTGGAAAGCTTTTGCTCAAGGTGCCTCCAACTTTGAGATTT
GTCATGGATGGCGAAATGCCAAGTTACTTGCTAGCTAAGGATTTGATTTTGCAAATTATT
GGTGAAATTTCTGTGTCTGGTGCTACATACAAAACAATGGAGTTCGTTGGCACCACAGTT
GAAAGTTTGAGTATGGAAGAAAGAATGACATTATGCAACATGGTTGTTGAAGCTGGTGGA
AAGAATGGTGTCATCCCAACCGATAAAACAACTTATGACTATCTCAAGGACAAGACTTCT
GTGCCCTATGAACCTGTTTATAGCGATGAAGGAGCCAGATTTCTTAAGGAGTACAGAATT
GATATTTCCAAGTTGGAACCTTTAGTGGCTAAGCCTCATTCACCTGATAATCGTGCTTTG
GCAAGAGAATGCAAAGATGTGAAAATCGACAGAGTATATATTGGATCTTGTACTGGTGGG
AAAACAGAGGACTTCATGGCCGCAGCAAAAGTTTTTCTAGCTTCAGGAAAGAAAATAAAA
GTTCCGACATTCTTGGTTCCTGCTACTCAAAAGGTGTGGATGGACATATATACTCTCCCG
GTTCCAGGATCTGGTGGTAAAACATGTTCCCAGATTTTTCAGGAAGCAGGTTGTGAAACA
CCTGCTAGTCCTAGT

Peptide Sequence

PEP ID

XP_016465802.1
PEP Infomation

PREDICTED: 3-isopropylmalate dehydratase large subunit-like, partial [Nicotiana tabacum]
Sequence

MASSAVASSSTFHVINKRDVGLSAFSSQPSFCIQTTKKKVVSKKIFSVMSPQQTERKPAT
TGSVKTGMTMTEKILARASDKPEVTPGDNVWVNVDVLMTHDIGGPASFGVFKEQFGQKAK
VWNPEKIVIIPDHYIFTADERANRNVDVLRDYCSEQNIKYFYDIKDRGNFRANPDYKGVC
HVALAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGTTDAGFVLGTGKLLLKVPPTLRF
VMDGEMPSYLLAKDLILQIIGEISVSGATYKTMEFVGTTVESLSMEERMTLCNMVVEAGG
KNGVIPTDKTTYDYLKDKTSVPYEPVYSDEGARFLKEYRIDISKLEPLVAKPHSPDNRAL
ARECKDVKIDRVYIGSCTGGKTEDFMAAAKVFLASGKKIKVPTFLVPATQKVWMDIYTLP
VPGSGGKTCSQIFQEAGCETPASPS

Transcript Sequence

Gene sequence data has not been registered.